BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021A10LP1|AL427706
(1030 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1770 1850 0.0
>3x_Contig1770
Length = 29267
Score = 1850 bits (929), Expect = 0.0
Identities = 1014/1035 (97%), Gaps = 11/1035 (1%)
Strand = Plus / Minus
Query: 1 gatcctccattgaatccgtcttccaagaatcccaataccaacaacaacactgtatctcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1310 gatcctccattgaatccgtcttccaagaatcccaataccaacaacaacactgtatctcag 1251
Query: 61 accatttcgtggaatcttgggaaaaggaagaaatattcttacaagccatagtcgacaccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1250 accatttcgtggaatcttgggaaaaggaagaaatattcttacaagccatagtcgacaccg 1191
Query: 121 tactaatcgacggaaacatcttgatctcaagagataccatcgttctaaaacaagaaacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1190 tactaatcgacggaaacatcttgatctcaagagataccatcgttctaaaacaagaaacct 1131
Query: 181 taccagtcacaccaaacatcagcatatgctgtaattcttccatggaagaatcacaactac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1130 taccagtcacaccaaacatcagcatatgctgtaattcttccatggaagaatcacaactac 1071
Query: 241 tcgatgcatacmacgtcatcagaatagcaatcatcaagcattgttccgaagcatgaaaaa 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1070 tcgatgcatacaacgtcatcagaatagcaatcatcaagcattgttccgaagcatgaaaaa 1011
Query: 301 ttcttttcccctgatctttttttaccccatcatcgtcaagtacagtattctattttagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1010 ttcttttcccctgatctttttttaccccatcatcgtcaagtacagtattctattttagaa 951
Query: 361 ctattactactactatatactcaacatatatcaatatctaavaacacacgtatttccaca 420
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 950 ctattactactactatatactcaacatatatcaatatctaaaaacacacgtatttccaca 891
Query: 421 caatccaaaaataccagccttctccatacatgccgcattgacacaatcgtattttctaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 890 caatccaaaaataccagccttctccatacatgccgcattgacacaatcgtattttctaca 831
Query: 481 aaccttctgaacttatcagccgtccgaagtggctgagtttgcgaaacttttccattcctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 aaccttctgaacttatcagccgtccgaagtggctgagtttgcgaaacttttccattcctc 771
Query: 541 tctcgcattgcatgattcanatcttcatcagtctcggccttttggacaaaaatcttataa 600
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 tctcgcattgcatgattcaaatcttcatcagtctcggccttttggacaaaaatcttataa 711
Query: 601 taggaaavragactatttaaatagaacctgaccataaacattgacttccatcaaaagggg 660
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 taggaaaaaagactatttaaatagaacctgaccataaacattgacttccatcaaaagggg 651
Query: 661 agagtacctctctgtattcagttcaacaacgtccaagggattaatatacaaggttataat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 agagtacctctctgtattcagttcaacaacgtccaagggattaatatacaaggttataat 591
Query: 721 acagtatgggtgttttcaacagacgtagtagtgggtgattcgagcagccatggttccacc 780
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 590 acagtatgggtgttttcaacagacgtagtagt-ggtgattcgagcagccatggttccacc 532
Query: 781 gggttcaaacg-agtgtangattacaaaggaagaccgtcagcatttgawagttcggactg 839
|||||||||| |||| | ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 531 -ggttcaaacgaagtg-aagattacaaaggaagaccgtcagcatttgaaagttcggactg 474
Query: 840 catcggttcatgatcctatccttgaggcggtgcaagagatgcagcccttcgagcaagcag 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 catcggttcatgatcctatccttgaggcggtgcaagagatgcagcccttcgagcaagcag 414
Query: 900 cagacacgttccagggcaatatgaacagacagtcgcacgtgcncacgggggagttgaa-g 958
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct: 413 cagacacgttccagggcaatatgaacagacagtcgcacgtgcccacgggggagttgaagg 354
Query: 959 rcgtgtttggac-acctatccagcaa-ctgatgtgtcta--cccacgcggt-acgtgamg 1013
||||||||||| ||||||||||||| |||||||||||| |||||||||| |||||| |
Sbjct: 353 acgtgtttggacaacctatccagcaacctgatgtgtctaaccccacgcggtcacgtgacg 294
Query: 1014 agcgt-cgttggata 1027
||||| |||||||||
Sbjct: 293 agcgtccgttggata 279
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6855
Number of Sequences: 1807
Number of extensions: 6855
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 1030
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1014
effective length of database: 10,329,639
effective search space: 10474253946
effective search space used: 10474253946
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)